Information for 5-CTGGTTTCCTTCCTKT (Motif 4)

A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T
Reverse Opposite:
G T C A T G C A C T G A C T A G C T A G C T G A C G T A C T A G T A C G T C G A T G C A T G C A T A G C T A G C C G T A T C A G
p-value:1e-15
log p-value:-3.499e+01
Information Content per bp:1.707
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets46.0 +/- 21.5bp
Average Position of motif in Background50.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGTTTCCTTCCTKT-
CCTTCCTTCCTTCCTTCC
 A C G T A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTGGTTTCCTTCCTKT
------CACTTCCTGT
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:3
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CTGGTTTCCTTCCTKT
--------CTTCCGGT
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CTGGTTTCCTTCCTKT-
-------ACTTCCTGTT
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:CTGGTTTCCTTCCTKT
---------TTCCTCT
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTTTCCTTCCTKT
CAKCTGKYCYYTTYCCC--
 A C G T A C G T A C G T A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTTTCCTTCCTKT
GYCTGGYYTNTGTCA---
 A C G T A C G T A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTGGTTTCCTTCCTKT-
-----NNAYTTCCTGHN
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTGGTTTCCTTCCTKT-
-------ACTTCCGGTT
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTGGTTTCCTTCCTKT-
-------ACTTCCTGBT
 A G T C G C A T A T C G A T C G A C G T A C G T A C G T A T G C G A T C A C G T A G C T A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T