Information for 9-GTCCTCTACAGCC (Motif 12)

A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A G C T C G T A A C T G C G T A A T C G A C T G C T G A A G T C
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.880
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.3 +/- 27.2bp
Average Position of motif in Background38.6 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GTCCTCTACAGCC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GTCCTCTACAGCC--
-------BCAGACWA
 A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTCTACAGCC-
TGWCCTCARNTGACC
 A C G T A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTCCTCTACAGCC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTCCTCTACAGCC----
TCNCTTTACAGCGNNNT
 A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTCCTCTACAGCC
------CACAGN-
 A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GTCCTCTACAGCC
--------CAGCC
 A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GTCCTCTACAGCC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTCCTCTACAGCC----
TCNNTTTACAGCGNNNT
 A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTCCTCTACAGCC----
TCNNTTTACAGCGNNNT
 A C T G A G C T A G T C A T G C A C G T A G T C C G A T C T G A A G T C C G T A A C T G G T A C A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T