Information for 8-CACAAAACCACCSACA (Motif 11)

A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T C G T A C G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C T G A C G T A T C G
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.900
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 29.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CACAAAACCACCSACA
----AAACCACANN--
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACAAAACCACCSACA----
CCCCAAACCACCCCCCCCCA
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CACAAAACCACCSACA
----AAACCACAGAN-
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACAAAACCACCSACA
----GGACCACCCACG
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CACAAAACCACCSACA
ATGTCACAACAACAC-----
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CACAAAACCACCSACA
---NWAACCACADNN-
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACAAAACCACCSACA-----
-TCAGCACCATGGACAGCTCC
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CACAAAACCACCSACA
----AAACCACAGC--
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CACAAAACCACCSACA
---NAAACCACAG---
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CACAAAACCACCSACA
---GCGACCACCGAA-
 A T G C C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C C G T A G T A C A G T C A T C G C G T A A G T C C G T A
A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T