Information for 19-CYKGGRACACTGSTGM (Motif 32)

A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A T G C A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A G T C T G A C C T G A A C T G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.865
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 28.0bp
Average Position of motif in Background51.5 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CYKGGRACACTGSTGM
CCAGGAACAG------
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM
---AAAACAATGG---
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CYKGGRACACTGSTGM
NNNNTGAGCACTGTNNG
 A C G T A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM
---VRAACAATGG---
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM
---GGAACAAAGR---
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CYKGGRACACTGSTGM
----RAACAATGGN--
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM-
--AGAGRRACAGCWGAC
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C A C G T
A C G T A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM
---VRRACAAWGG---
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM
----GAACAATGGN--
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CYKGGRACACTGSTGM
----GAACAATGG---
 A G T C A G C T A C G T C T A G A C T G C T A G C G T A A G T C G T C A A G T C A C G T A C T G A T C G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T