Information for 17-CTGCACCGCAACA (Motif 20)

A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G G C A T A G C T A C T G A T G C C T A G A C T G C G A T A C T G A G T C C G T A A T C G
p-value:1e-8
log p-value:-1.907e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.4 +/- 28.3bp
Average Position of motif in Background43.2 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGCACCGCAACA--
AATCGCACTGCATTCCG
 A C G T A C G T A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGCACCGCAACA
--GCTCCG-----
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGCACCGCAACA-
--SCCTAGCAACAG
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTGCACCGCAACA--
-----TTGCAACATN
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGCACCGCAACA
--AAACCGCAA--
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGCACCGCAACA--
GAGCACAGCAGGACA
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGCACCGCAACA
-GGCCCCGCCCCC
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGCACCGCAACA--
CCGCATAGCAACGGA
 A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTGCACCGCAACA
TGTTKCCTAGCAACM
 A C G T A C G T A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCACCGCAACA
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A T G C C G A T A C T G A G T C C G T A A G T C A G T C A T C G A G T C T C G A C G T A A G T C C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T