Information for 13-ACTCTTACCACTT (Motif 7)

C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T
Reverse Opposite:
C G T A C G T A A C T G C G A T C T A G T C A G C A G T C G T A C G T A T A C G T C G A C T A G G A C T
p-value:1e-20
log p-value:-4.819e+01
Information Content per bp:1.692
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets54.4 +/- 28.3bp
Average Position of motif in Background27.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:ACTCTTACCACTT---
------ACCACTTGAA
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.66
Offset:6
Orientation:forward strand
Alignment:ACTCTTACCACTT--
------ACCACTTAA
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ACTCTTACCACTT--
------ACCACTTAA
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTCTTACCACTT--
NTNTTCTTATCAGTNTN
 A C G T A C G T C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ACTCTTACCACTT--
-----MRSCACTYAA
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTCTTACCACTT--
NNANTCTTATCTNNNNN
 A C G T A C G T C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACTCTTACCACTT------
--CATAACCACTTAACAAC
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACTCTTACCACTT
---ATTAACACCT
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ACTCTTACCACTT----
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.61
Offset:7
Orientation:forward strand
Alignment:ACTCTTACCACTT---
-------CCACTTGAA
 C T G A A G T C A G C T A T G C G A C T C G A T G C T A A G T C A G T C C G T A T G A C G C A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A