Information for 3-NNNSCAGCTGBND (Motif 4)

T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
Reverse Opposite:
G T A C T G A C T C A G A G T C G T C A A C T G A T G C C G A T A C T G A T G C A G C T C T A G A C G T
p-value:1e-51
log p-value:-1.186e+02
Information Content per bp:1.585
Number of Target Sequences with motif201.0
Percentage of Target Sequences with motif25.38%
Number of Background Sequences with motif225.2
Percentage of Background Sequences with motif7.64%
Average Position of motif in Targets51.4 +/- 23.9bp
Average Position of motif in Background52.0 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NNNSCAGCTGBND
NNVVCAGCTGBN-
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:NNNSCAGCTGBND
---GCAGCTGTNN
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NNNSCAGCTGBND
-CAGCAGCTGN--
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NNNSCAGCTGBND
-NAACAGCTGT--
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNNSCAGCTGBND
--ANCAGCTG---
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:NNNSCAGCTGBND
NNAGCAGCTGCT-
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.93
Offset:2
Orientation:forward strand
Alignment:NNNSCAGCTGBND
--GACAGCTGCAG
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NNNSCAGCTGBND
-NNVCAGCTGB--
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-NNNSCAGCTGBND
NGNGACAGCTGCN-
 A C G T T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NNNSCAGCTGBND
-NAHCAGCTGD--
 T G C A G A C T T C G A T A C G G T A C C G T A A T C G T G A C A C G T A C T G A G T C A C T G C A T G
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T