Information for 25-GTTAGCATTT (Motif 21)

T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G A T C T A G A G T C C G A T T C G A C G T A A G T C
p-value:1e-7
log p-value:-1.804e+01
Information Content per bp:1.850
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.7 +/- 28.7bp
Average Position of motif in Background48.7 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0042.1_Mafk_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTTAGCATTT---
AAGTCAGCANTTTTN
 A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGCATTT-
NGTCAGCANTTT
 A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GTTAGCATTT--
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTAGCATTT-
GTCAGCANNTN
 T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGCATTT
BTVATTWGCATA-
 A C G T A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GTTAGCATTT-
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GTTAGCATTT---
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTTAGCATTT--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGCATTT
CTCATTTGCATW-
 A C G T A C G T A C G T T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTTAGCATTT
ATTTGCATAA
 T A C G A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A