Information for 15-GAGCCTTTGCASG (Motif 11)

A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
Reverse Opposite:
T A G C A T C G A C G T A C T G A G T C T C G A T C G A T C G A C T A G A T C G T A G C G A C T A G T C
p-value:1e-18
log p-value:-4.353e+01
Information Content per bp:1.676
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.4 +/- 21.5bp
Average Position of motif in Background40.3 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGCCTTTGCASG
GAGSCCGAGC---
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCCTTTGCASG
GCGCCTGCGCA--
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGCCTTTGCASG--
TGGACTTTGNNCTCN
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAGCCTTTGCASG
---CCTTTGAWGT
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGCCTTTGCASG-
TGACCTTTGCCCTA
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGCCTTTGCASG
NRRGGGTCTT------
 A C G T A C G T A C G T A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGCCTTTGCASG-
TGACCTTTGCCCCA
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAGCCTTTGCASG
---CCTTTGATGT
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGCCTTTGCASG
AGCGCGCC--------
 A C G T A C G T A C G T A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGCCTTTGCASG--
TGACCTTTGCCCTAN
 A C T G C T G A A T C G A T G C A G T C A G C T A G C T A G C T T C A G G T A C G T C A T A G C A T C G A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C