Information for 17-HGCTGCCAVGAGGCAG (Motif 20)

G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C C G A T A T G C A C T G C G A T C A T G A T C G G T A C C G T A A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.815
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.5 +/- 19.6bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:HGCTGCCAVGAGGCAG
KGTTGCTAGGMAACA-
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
---TGCCCCAGGGCA-
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
---TGCCCCAGGGCA-
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
---TGCCCCCGGGCA-
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
NNCTTCCNGGAAGN--
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG---
-------AGGAAACAGCTG
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
---TGTCAGGGGGCG-
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:HGCTGCCAVGAGGCAG
NGCTN-----------
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
-NTTTCCNGGAAA---
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:HGCTGCCAVGAGGCAG
--TTTCCAGGAAATGG
 G A C T A C T G A G T C C G A T A C T G A T G C G T A C C G T A T A G C A T C G C G T A C T A G A C T G A G T C C G T A A C T G
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G