Information for 14-GTGTGTGCATCTTTTA (Motif 12)

A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G T A A C T G G T C A A C G T A C T G G T A C C G T A G T A C C G T A A T G C C G T A G T A C
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 12.8bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGCATCTTTTA
NNGCGTGTGTGCNGCN----
 A C G T A C G T A C G T A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGCATCTTTTA
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTGTGTGCATCTTTTA-
--CCTTGCAATTTTTNN
 A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTGCATCTTTTA
NNGTATGTGCACATNNN-
 A C G T A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTGCATCTTTTA
NTNTATGTGCACATNNN-
 A C G T A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GTGTGTGCATCTTTTA--
--------ANCGTTTANN
 A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTGTGTGCATCTTTTA--
----ATGAATAATTAATG
 A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GTGTGTGCATCTTTTA----
----ATGCATAATTAATGAG
 A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GTGTGTGCATCTTTTA
GGGCCGTGTGCAAAAA---
 A C G T A C G T A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GTGTGTGCATCTTTTA
CCATTGTATGCAAAT----
 A C G T A C G T A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G A G T C C G T A A C G T A G T C C G A T A C G T A C G T A C G T G T C A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T A C G T