Information for 5-TGAGCGCCTGCCATGA (Motif 9)

A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G A T C T A G A C T G A G T C C G T A A C T G A C T G A G T C C T A G A G T C A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 13.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCGCCTGCCATGA
CTTGAGTGGCT-------
 A C G T A C G T A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGAGCGCCTGCCATGA
-SNGCACCTGCHS---
 A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGAGCGCCTGCCATGA
TGAGTGACAGSC----
 A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGAGCGCCTGCCATGA
CTGGCAGNCTGCCA---
 A C G T A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCGCCTGCCATGA
TTGAGTGSTT-------
 A C G T A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TGAGCGCCTGCCATGA
-----GTCCGCCATTA
 A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCGCCTGCCATGA
RGTTAGTGCCCY------
 A C G T A C G T A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCGCCTGCCATGA
TTAAGTGCTT-------
 A C G T A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TGAGCGCCTGCCATGA
-GACCCCCCGCTGTG-
 A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGAGCGCCTGCCATGA
---CCCCCTGCTGTG-
 A C G T A C T G C G T A C T A G A G T C A C T G A G T C A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T