Information for 7-CAGGATTGACAAG (Motif 8)

A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
Reverse Opposite:
G T A C A C G T A C G T C T A G A C G T A G T C C G T A C G T A A C G T A G T C A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 28.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGGATTGACAAG
-NTGATTGACAGN
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAGGATTGACAAG
-----TTGACAGG
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGGATTGACAAG
-BTGABTGACAGS
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGGATTGACAAG-----
--GGATTGACAGGTCNTT
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGGATTGACAAG
-----TTGACAG-
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGGATTGACAAG-----
--GTATTGACAGGTNNTT
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGGATTGACAAG
-----TTGACAGC
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAGGATTGACAAG
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGGATTGACAAG
----RHTGWCAR-
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGGATTGACAAG-----
--NNATTGACAGGTGCTT
 A G T C C G T A A T C G A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T