Information for 4-CGTYTCCYGGACT (Motif 4)

A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
Reverse Opposite:
C G T A C T A G A G C T A G T C A G T C C T G A A C T G A C T G C G T A C T G A C G T A A G T C C T A G
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 28.6bp
Average Position of motif in Background45.7 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1/MA0137.3/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTYTCCYGGACT
--TTTCCTGGAAA
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTYTCCYGGACT----
--TTTCCTGGAAAGNNN
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTYTCCYGGACT
NNNTTTCCTGGAAA
 A C G T A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTYTCCYGGACT
--CTTCCNGGAA-
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTYTCCYGGACT-
NATTTCCNGGAAAT
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGTYTCCYGGACT
-NTTTCCNGGAAA
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGTYTCCYGGACT-
NNCTTCCNGGAAGN
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGTYTCCYGGACT---
--TTTCCTAGAAAGCA
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGTYTCCYGGACT
-ATTTCCAAGAA-
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGTYTCCYGGACT
CACTTCCTGT---
 A G T C A C T G A C G T A G C T A C G T A G T C A G T C A G C T A C T G A C T G C T G A A G T C A C G T
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T