Information for 3-CAGTGGGTTTCCA (Motif 3)

G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
Reverse Opposite:
A C G T C T A G A C T G C G T A C G T A C G T A T A G C G T A C A G T C C G T A A T G C C G A T A C T G
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.824
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.6 +/- 21.4bp
Average Position of motif in Background79.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGTGGGTTTCCA
--GGGGATTTCC-
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGTGGGTTTCCA
--GGGGATTTCC-
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGGTTTCCA
GTCTGTGGTTT----
 A C G T A C G T G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGTGGGTTTCCA
--GGGAATTTCC-
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGTGGGTTTCCA
-NGGGGATTTCCC
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CAGTGGGTTTCCA
------TTTTCCA
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGTGGGTTTCCA--
-----ATTTTCCATT
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGTGGGTTTCCA--
-----ATTTTCCATT
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGTGGGTTTCCA--
-----ATTTTCCATT
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGTGGGTTTCCA--
-----ATTTTCCATT
 G T A C C G T A A T C G A C G T A C T G A C T G A C T G C G A T A C G T A C G T A G T C A G T C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T