Information for 3-TGTCTGTGGT (Motif 11)

C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T
Reverse Opposite:
G T C A A G T C G T A C C T G A G A T C C T G A C T A G G C T A T A G C G C T A
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.653
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif9.11%
Number of Background Sequences with motif1764.8
Percentage of Background Sequences with motif3.63%
Average Position of motif in Targets46.1 +/- 25.7bp
Average Position of motif in Background50.0 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TGTCTGTGGT---
-NNHTGTGGTTWN
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TGTCTGTGGT--
-GTCTGTGGTTT
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.81
Offset:2
Orientation:forward strand
Alignment:TGTCTGTGGT--
--GCTGTGGTTT
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TGTCTGTGGT---
---CTGTGGTTTN
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TGTCTGTGGT--
--NNTGTGGTTT
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TGTCTGTGGT--
--TTTGCGGTTT
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGTCTGTGGT--
---TTGCGGTTT
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTCTGTGGT---
-NTCGGTGGTCGC
 C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T A C G T A C G T A C G T
A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGTGGT
VBSYGTCTGG---
 A C G T A C G T A C G T C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGTGGT
TWGTCTGV---
 A C G T C G A T A T C G C G A T G A T C G A C T C T A G G A C T C A T G T C A G C A G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T