Information for 1-STGCAGCTGC (Motif 1)

A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
Reverse Opposite:
T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A T A C G
p-value:1e-123
log p-value:-2.855e+02
Information Content per bp:1.764
Number of Target Sequences with motif427.0
Percentage of Target Sequences with motif52.78%
Number of Background Sequences with motif7389.1
Percentage of Background Sequences with motif16.34%
Average Position of motif in Targets50.5 +/- 24.6bp
Average Position of motif in Background50.4 +/- 38.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:STGCAGCTGC--
--GCAGCTGTNN
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:STGCAGCTGC-
-CGCAGCTGCG
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---STGCAGCTGC----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-STGCAGCTGC-
NNAGCAGCTGCT
 A C G T A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:STGCAGCTGC-
NNGCAGCTGTC
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:STGCAGCTGC-
-AGCAGCTGCT
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:STGCAGCTGC
CAGCAGCTGN
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.89
Offset:1
Orientation:forward strand
Alignment:STGCAGCTGC----
-TGCAGCTGTCCCT
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:STGCAGCTGC-
NNGCAGCTGTT
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:STGCAGCTGC---
-NVCAGCTGBBNN
 A T G C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C