Information for 4-TAAATAGTGTTYC (Motif 5)

A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A C G T A A T G C C G T A G T A C G C A T C G T A A C G T A G C T A C G T G T C A
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.781
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif38.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.8 +/- 17.0bp
Average Position of motif in Background45.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR3C2/MA0727.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAAATAGTGTTYC-
GGGAACATTGTGTTCCC
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

PH0107.1_Msx2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TAAATAGTGTTYC
ANCGCTAATTGGTCTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAAATAGTGTTYC-
GGGTACATAATGTTCCC
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAATAGTGTTYC
GCTAAACGGT-----
 A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAAATAGTGTTYC
NNATNAATTGTTTNN-
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAAATAGTGTTYC
CCAAAAATAG------
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAAATAGTGTTYC-
NGGTACACNGTGTTCCC
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

PH0033.1_Gbx1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TAAATAGTGTTYC
TGCCACTAATTAGTGTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAAATAGTGTTYC-
AAAATTGTTATGAA
 A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TAAATAGTGTTYC
NNNNNCTAATTAGTTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C G T C G T A C A T G A C G T A T C G C G A T A C G T A G T C A G T C
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T A C G T