Information for 4-GAAGGCTTGA (Motif 23)

A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
Reverse Opposite:
G A C T T G A C G C T A T C G A A T C G T A G C A G T C A G C T A C G T T G A C
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.689
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif6.55%
Number of Background Sequences with motif714.8
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets48.7 +/- 23.3bp
Average Position of motif in Background48.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGCTTGA
NGAAGC-----
 A C G T A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAAGGCTTGA
--AAGCTTG-
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGGCTTGA
--AGGCCTNG
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGGCTTGA-
-AAGGTGTGAA
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A A C G T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGGCTTGA----
CAAAGGCGTGGCCAG
 A C G T A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAAGGCTTGA
--AGGTGTGA
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGGCTTGA----
-AAGGTGTGAAAAT
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAAGGCTTGA
--AGGTGTGA
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAAGGCTTGA
ACCGGAAG------
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGGCTTGA--
-TAGGTGTGAAG
 A C T G C G T A C T G A C T A G A T C G T A G C A G C T C G A T A C T G C T G A A C G T A C G T
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G