Information for 12-CGACGTATATCTT (Motif 20)

T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C G T G T C A A C G T G T C A A G T C A C T G A G C T A G T C A C T G
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 22.6bp
Average Position of motif in Background27.5 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGACGTATATCTT----
NNNCTGATATCTCNNNN
 T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGACGTATATCTT
--AAGGATATNTN
 T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGACGTATATCTT----
ANNNGGATATATCCNNN
 T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGACGTATATCTT
-GACATATGTT--
 T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGACGTATATCTT
GGCCATAAATCAC
 T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGACGTATATCTT
ATGACGTA------
 A C G T T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGACGTATATCTT
NNAGATNVNWATCTN
 A C G T A C G T T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CGACGTATATCTT
GGCCATAAATCA-
 T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGACGTATATCTT-
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------CGACGTATATCTT
NNTTTANNCGACGNA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G C T G A A G T C C T A G A C G T C G T A A C G T C G T A A C G T A G T C A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T