Information for 14-TGGCAACAWC (Motif 25)

A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
Reverse Opposite:
A T C G C G T A A C G T A C T G A C G T A C G T A C T G G T A C A G T C C G T A
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif38.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets62.3 +/- 20.9bp
Average Position of motif in Background50.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGGCAACAWC
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGGCAACAWC
TTGCAACATN
 A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACAWC
CTTGGCAA----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------TGGCAACAWC
GTTGCCATGGCAAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAACAWC-
ATGTAAACADGS
 A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C A C G T
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACAWC
SCTGTCARCACC
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACAWC
NTTGGCANN---
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAACAWC
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACAWC
TATGTAAACANG
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGGCAACAWC
TTGGCA-----
 A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C C G T A C G A T A T G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T