Information for 9-MSCYCAGGGCCWCCYW (Motif 21)

G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G C T A G C G A T A C T G A C T G A G T C A T G C A G T C A C G T A C T G C T A G A C T G A T C G A C G T
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.846
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.3 +/- 27.3bp
Average Position of motif in Background61.4 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MSCYCAGGGCCWCCYW
GCCTCAGGGCAT----
 G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-MSCYCAGGGCCWCCYW
CCCCCTTGGGCCCC---
 A C G T G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:MSCYCAGGGCCWCCYW--
------GGACCACCCACG
 G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MSCYCAGGGCCWCCYW
--NTCAAGGTCA----
 G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:MSCYCAGGGCCWCCYW
SCCTSAGGSCAW----
 G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-MSCYCAGGGCCWCCYW
AAGTTCAAGGTCAGC--
 A C G T G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--MSCYCAGGGCCWCCYW
TGCCCNNAGGGCA-----
 A C G T A C G T G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--MSCYCAGGGCCWCCYW
TTGCCCTAGGGCAT----
 A C G T A C G T G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:MSCYCAGGGCCWCCYW
-TGCCTGCGYCMCCTT
 G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--MSCYCAGGGCCWCCYW
TGCCCTNAGGGCA-----
 A C G T A C G T G T C A A T G C A G T C A G T C A G T C C G T A A C T G A T C G A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T