Information for 3-GGCTCCCTCYGSA (Motif 3)

A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
Reverse Opposite:
A C G T A T G C T A G C T C A G A C T G C G T A C T A G A C T G A C T G G T C A A C T G A G T C A G T C
p-value:1e-15
log p-value:-3.544e+01
Information Content per bp:1.834
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.2 +/- 25.6bp
Average Position of motif in Background47.9 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTCCCTCYGSA
-GCTCCG------
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCYGSA
GGCGCGCT-----
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTCCCTCYGSA
NNNGGGGCGCCCCCNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGCTCCCTCYGSA---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTCCCTCYGSA
-GCTGASTCAGCA
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCYGSA
NGCTN--------
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCYGSA
NCTTCCCGCCC--
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCYGSA
GGCTCYAKCAYC-
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGCTCCCTCYGSA
-GGTCCCGCCC--
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCTCCCTCYGSA
GGCGACCACCGA-
 A C T G A C T G A G T C A C G T T A G C A G T C A G T C A C G T A G T C A G T C A T C G A T C G G T C A
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T