Information for 12-ATGCGCATCGTWA (Motif 14)

C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
Reverse Opposite:
C G A T C G A T C G T A G T A C A C T G C G T A A C G T A C T G A T G C C T A G A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.409e+01
Information Content per bp:1.877
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 9.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGCGCATCGTWA
TATGCAAAT-----
 A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATGCGCATCGTWA
BTVATTWGCATA----
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGCGCATCGTWA
ATGCCCACC----
 C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGCGCATCGTWA
NAGATWNBNATCTNN-
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATGCGCATCGTWA---
------GTCGTAAAAA
 C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATCGTWA
TTATGCAAAT-----
 A C G T A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATGCGCATCGTWA
CTCATTTGCATW----
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATGCGCATCGTWA
TATGCAAAT-----
 A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGCGCATCGTWA
AATTTGCATANT--
 A C G T C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATGCGCATCGTWA---
------GTCGTAAAAT
 C G T A A C G T A C T G A G T C A T C G A G T C C G T A A C G T A G T C A C T G A C G T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T