Information for 11-TDCAATCACACGA (Motif 13)

C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
Reverse Opposite:
C A G T T G A C A T C G C G A T A C T G C G A T A T C G C G T A A G C T A C G T T A C G G A C T G T C A
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.689
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 25.5bp
Average Position of motif in Background61.1 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TDCAATCACACGA
-CCAATCAA----
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TDCAATCACACGA
-CAAATCACTG--
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TDCAATCACACGA
--AAACCACANN-
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TDCAATCACACGA
-NWAACCACADNN
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TDCAATCACACGA
--AAACCACAGC-
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TDCAATCACACGA
-NAAACCACAG--
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TDCAATCACACGA
--AAATCACAGCA
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TDCAATCACACGA
--AAACCACAGAN
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

TFEC/MA0871.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TDCAATCACACGA-
----ATCACGTGAC
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A A C G T
A C G T A C G T A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TDCAATCACACGA-
----GTCACATGAY
 C A G T C G T A A T G C C G T A C T G A G C A T T A G C C G T A G T A C C G T A A T G C A C T G G C T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C