Information for 12-CTGAGGTCCC (Motif 27)

A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-8.266e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.2 +/- 27.4bp
Average Position of motif in Background55.4 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGAGGTCCC
-TRAGGTCA-
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGAGGTCCC
-TGACGT---
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGAGGTCCC
-TGACGTCA-
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTCCC
CGGTGACGTCAC
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGAGGTCCC
--AAGGTCAC
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGAGGTCCC
---AGGTCA-
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGAGGTCCC
-AGRGGTCA-
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTCCC
NRRTGACGTCAT
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGAGGTCCC----
----GGTCCCGCCC
 A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGAGGTCCC
NGRTGACGTCAY
 A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T