Information for 9-TTTTAAGTGT (Motif 24)

A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A T G C A C G T C G A T C G T A G T C A C G T A C G T A
p-value:1e-6
log p-value:-1.414e+01
Information Content per bp:1.926
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets18.8 +/- 4.4bp
Average Position of motif in Background60.2 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TTTTAAGTGT-
--TTAAGTGGN
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TTTTAAGTGT-
--TTAAGTGGT
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTTTAAGTGT
--TTAAGTGC
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTTAAGTGT-
-NTCAAGTGGN
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGTGT-----
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTTTAAGTGT
-NTCAAGTGG
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGTGT-----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAAGTGT----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGTGT----
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTTTAAGTGT
--TTAATTG-
 A C G T A C G T A C G T A C G T C G T A C G T A A T C G A C G T A C T G A C G T
A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T