Information for 7-TTGCTTGTTC (Motif 22)

A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.423e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 22.2bp
Average Position of motif in Background30.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGCTTGTTC-
TTTGATTGATGN
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTTGTTC----
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGCTTGTTC
TTGATTGN--
 A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTTGTTC----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTGCTTGTTC
---ATTGTT-
 A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTTGTTC----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTTGTTC---
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTTGTTC----
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGCTTGTTC
GAATGTTTGTTT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTGCTTGTTC-----
-TAATTGTTCTAAAC
 A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C