Information for 5-YYYACAATCACMC (Motif 9)

A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C T G A C G T C T G A C T G A C T G A
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 31.9bp
Average Position of motif in Background64.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:YYYACAATCACMC
---CCAATCAA--
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:YYYACAATCACMC
---CAAATCACTG
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:YYYACAATCACMC--
-------TCACACCT
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:YYYACAATCACMC--
-------TCACACCT
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YYYACAATCACMC
NNNTAACAATTATAN
 A C G T A C G T A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:YYYACAATCACMC---
------ATCACCCCAT
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:YYYACAATCACMC---
------ATCACCCCAC
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YYYACAATCACMC---
------ATCACCCCAT
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YYYACAATCACMC
--GACAATGNN--
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:YYYACAATCACMC---
----CNGTCACGCCAC
 A G C T A G C T A G C T C G T A G T A C C G T A C G T A A G C T A G T C C G T A A G T C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C