Information for 12-CGCCCCTTVCCTGACT (Motif 18)

G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
Reverse Opposite:
C G T A C T A G A G C T G T A C G T C A T C A G A C T G A T C G G T C A C T G A A C T G A C T G A C T G A C T G A T G C C A T G
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.773
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCCCCTTVCCTGACT
AAGACCCYYN-------
 A C G T G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGCCCCTTVCCTGACT
---CCCCCCCC-----
 G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCTTVCCTGACT
GGTCCCGCCCCCTTCTC----
 A C G T A C G T A C G T A C G T A C G T G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCCCCTTVCCTGACT--
---GTCATGCHTGRCTGS
 G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGCCCCTTVCCTGACT
---CCCCTCCCCCAC-
 G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGCCCCTTVCCTGACT
--NNACTTGCCTT---
 G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCCTTVCCTGACT
ATCCCCGCCCCTAAAA-----
 A C G T A C G T A C G T A C G T A C G T G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCCTTVCCTGACT
CGCCCCCTGACA-----
 A C G T G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGCCCCTTVCCTGACT-
TGACCTTTGCATGACCT
 G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGCCCCTTVCCTGACT
TCCGCCCCCGCATT----
 A C G T A C G T G T A C T A C G G T A C A G T C A G T C A G T C A G C T A C G T T A G C G T A C A G T C A C G T A C T G T C G A A G T C A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T