Information for 5-TAGCAACAGC (Motif 15)

G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T C T A G A G C T C G A T A C T G A G T C A C G T C T G A
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif142.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets49.0 +/- 27.7bp
Average Position of motif in Background49.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TAGCAACAGC
SCCTAGCAACAG-
 A C G T A C G T A C G T G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAACAGC
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.70
Offset:-9
Orientation:forward strand
Alignment:---------TAGCAACAGC----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAACAGC
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAGCAACAGC---
ATGCAACAGGTGG
 G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAGCAACAGC-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAGCAACAGC-----
GAGCAACAGGTGGTT
 G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAGCAACAGC
TTGCAACATN
 G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Tcf21/MA0832.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAGCAACAGC------
--GCAACAGCTGTTGT
 G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TAGCAACAGC
TGTTKCCTAGCAACM--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G A G T C G C T A C T G A A G T C C G T A A C T G G T A C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T