Information for 5-GCCTCTGAAACTGAGG (Motif 13)

A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
Reverse Opposite:
G T A C A G T C G A C T A G T C C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G C T G A A C T G C T A G A G T C
p-value:1e-6
log p-value:-1.570e+01
Information Content per bp:1.931
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 11.0bp
Average Position of motif in Background57.1 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCTCTGAAACTGAGG
---ACTGAAACCA---
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCTCTGAAACTGAGG
---TTTGAAACCG---
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCTGAAACTGAGG
GGAAANTGAAACTNA--
 A C G T A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GCCTCTGAAACTGAGG--
------GAAACTGAAACT
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCCTCTGAAACTGAGG--
------GAAAGTGAAAGT
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCCTCTGAAACTGAGG
TCGAAACCGAAACT----
 A C G T A C G T A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCCTCTGAAACTGAGG
AAACCTCGTAAAATTT--
 A C G T A C G T A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GCCTCTGAAACTGAGG
-SCCTAGCAACAG---
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GCCTCTGAAACTGAGG
------NNNANTGA--
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.47
Offset:6
Orientation:forward strand
Alignment:GCCTCTGAAACTGAGG
------NHAACBGYYV
 A C T G A G T C A G T C A G C T A G T C C G A T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C T G A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A