Information for 2-TTATTGTGAT (Motif 11)

C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T
Reverse Opposite:
G C T A A C G T T G A C C G T A A G T C C G T A G T C A A G C T C G T A C G T A
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.743
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif650.6
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets60.9 +/- 22.0bp
Average Position of motif in Background47.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TTATTGTGAT--
CTATAATTGTTAGCG
 A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTATTGTGAT----
TAATTGTTCTAAAC
 C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGTGAT--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTATTGTGAT
CTCATTGTC--
 A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGTGAT---
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTATTGTGAT---
AANTTATTGTTCTNNA
 A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTATTGTGAT---
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTATTGTGAT-----
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTATTGTGAT---
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTATTGTGAT-
--ATTGTTTAN
 C G A T A C G T C T G A C A G T C G A T A C T G A C G T A C T G G T C A C G A T A C G T
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C