Information for 1-ATGTSMWTTGMRG (Motif 1)

C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G
Reverse Opposite:
A T G C A G T C C A G T G T A C C G T A C G T A C G T A A C T G A T C G C G T A G T A C C G T A A C G T
p-value:1e-12
log p-value:-2.831e+01
Information Content per bp:1.831
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif23.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.2 +/- 24.0bp
Average Position of motif in Background55.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGTSMWTTGMRG
-TGTGGATTNNN-
 C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGTSMWTTGMRG
NNTGTGGATTSS--
 A C G T C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATGTSMWTTGMRG
AAGATATCCTT-----
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATGTSMWTTGMRG-
----CCTTTGAWGT
 C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGTSMWTTGMRG----
NNTTCCTTTGATCTNNA
 C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGTSMWTTGMRG----
NNTTCCTTTGATCTANA
 C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATGTSMWTTGMRG-
----CCTTTGATGT
 C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGTSMWTTGMRG
NNTGTGGTTT----
 A C G T C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ATGTSMWTTGMRG
CCATGTGCTT-----
 A C G T A C G T C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ATGTSMWTTGMRG---
------TTTGCGGTTT
 C G T A A C G T A C T G A C G T A T G C G T A C C G A T A C G T A C G T A C T G G T C A C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T