Information for 3-ACAAATATTTGCCHTT (Motif 4)

T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
Reverse Opposite:
T C G A C G T A C G T A C A T G A T C G A G T C C G T A G T C A C G T A A C G T C G T A A C G T A C G T A C G T C A T G A C G T
p-value:1e-13
log p-value:-3.201e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 19.5bp
Average Position of motif in Background59.7 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTTGCCHTT
NNTNNCAATATTAG-----
 A C G T A C G T A C G T T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAAATATTTGCCHTT
NNTNNCAATATTAG-----
 A C G T A C G T A C G T T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ACAAATATTTGCCHTT
------ATTTGCATAT
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACAAATATTTGCCHTT
-----TRTTTACTTW-
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACAAATATTTGCCHTT
---TTCATTTGCATAT
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACAAATATTTGCCHTT-
--ANATTTTTGCAANTN
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACAAATATTTGCCHTT
------ATTTGCATAA
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAAATATTTGCCHTT
--AAATCACTGC----
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAAATATTTGCCHTT
--AAACATATGTTT--
 T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAAATATTTGCCHTT
AAACAAACATTC------
 A C G T A C G T T C G A G A T C C G T A G T C A C G T A C G A T C G T A A C G T A C G T A C G T A C T G A T G C G A T C G C A T A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T