Information for 5-TGCCCTCTAGTGG (Motif 3)

A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A T G C G A C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C T C G A
p-value:1e-14
log p-value:-3.373e+01
Information Content per bp:1.831
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets63.6 +/- 20.3bp
Average Position of motif in Background49.5 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TGCCCTCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCTCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-6
Orientation:forward strand
Alignment:------TGCCCTCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCCCTCTAGTGG
-GCCATCTGTT--
 A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCTAGTGG
ATGCCCACC-----
 A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTAGTGG
NTGCCCANNGGTNA
 A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCTCTAGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCTAGTGG
ATGCCAACC-----
 A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCTCTAGTGG
GCCGCCATCTTG---
 A C G T A C G T A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:TGCCCTCTAGTGG--
---------GTGGAT
 A G C T A C T G A G T C A G T C T G A C G A C T A G T C A C G T C G T A A T C G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T