Motif 14

Information for 15-GCCCGCGGGCCGG (Motif 14)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.564e+01
Information Content per bp:	1.803
Number of Target Sequences with motif	6.0
Percentage of Target Sequences with motif	0.73%
Number of Background Sequences with motif	13.5
Percentage of Background Sequences with motif	0.03%
Average Position of motif in Targets	45.0 +/- 29.8bp
Average Position of motif in Background	44.3 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)	0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:	1
Score:	0.68
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG TGCCCCCGGGCA--

TFAP2C/MA0524.2/Jaspar

Match Rank:	2
Score:	0.67
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG TGCCCCAGGGCA--

TFAP2B/MA0811.1/Jaspar

Match Rank:	3
Score:	0.67
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG TGCCCCAGGGCA--

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:	4
Score:	0.65
Offset:	-2
Orientation:	reverse strand
Alignment:	--GCCCGCGGGCCGG NTGCCCTTGGGCGN-

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:	5
Score:	0.63
Offset:	-2
Orientation:	forward strand
Alignment:	--GCCCGCGGGCCGG TTGCCCTAGGGCAT-

PB0103.1_Zic3_1/Jaspar

Match Rank:	6
Score:	0.62
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG- CCCCCCCGGGGGGGT

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:	7
Score:	0.61
Offset:	-2
Orientation:	forward strand
Alignment:	--GCCCGCGGGCCGG TCACCTCTGGGCAG-

PB0101.1_Zic1_1/Jaspar

Match Rank:	8
Score:	0.61
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG CACCCCCGGGGGGG

PB0102.1_Zic2_1/Jaspar

Match Rank:	9
Score:	0.60
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG- CCCCCCCGGGGGGGT

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:	10
Score:	0.58
Offset:	-1
Orientation:	forward strand
Alignment:	-GCCCGCGGGCCGG TGCCCTGAGGGCA-