Information for 13-GTCACCTTGTACA (Motif 13)

A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A G T C G T C A C G T A C A T G A C T G A G C T C T A G C G T A A G T C
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 23.4bp
Average Position of motif in Background31.8 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCACCTTGTACA
NTGACCTTGA---
 A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCACCTTGTACA---
GAGCCCTTGTCCCTAA
 A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCTTGTACA
BNTGDCCTTG----
 A C G T A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTCACCTTGTACA
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCACCTTGTACA--
TGTTCCCATTGTGTACT
 A C G T A C G T A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCTTGTACA
GGTCACGTGGC---
 A C G T A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCACCTTGTACA
GGGTCAACGAGTTCA
 A C G T A C G T A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTGTACA
-TGACCTTGAV--
 A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCACCTTGTACA
ATGACCTTGAA--
 A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCTTGTACA-
GCTGACCTTGAACTN
 A C G T A C T G A C G T A G T C C T G A A G T C G T A C A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T