Information for 10-TCAGGTTAAA (Motif 11)

C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
Reverse Opposite:
C A G T A C G T A C G T T C G A C T G A A T G C G T A C A C G T A T C G C G T A
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.828
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif141.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets51.5 +/- 31.9bp
Average Position of motif in Background53.2 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCAGGTTAAA
GKVTCADRTTWC-
 A C G T A C G T A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCAGGTTAAA
VCAGGTRDRY
 C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCAGGTTAAA
TRAGGTCA--
 C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCAGGTTAAA
AACAGGTGT--
 A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCAGGTTAAA
-CAGGTGAGG
 C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAGGTTAAA-----
NNNTTAGTTAACTNANN
 A C G T A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGTTAAA
NNCAGGTGNN-
 A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCAGGTTAAA---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCAGGTTAAA
GKMTCADRTTWC-
 A C G T A C G T A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

ETV2/MA0762.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCAGGTTAAA
TATTTCCGGTT---
 A C G T A C G T A C G T A C G T C G A T A T G C C G T A A C T G T A C G A G C T A G C T G T C A C G T A G C T A
G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T A C G T A C G T A C G T