Information for 9-GCTGGGTAACAGC (Motif 4)

C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
Reverse Opposite:
A C T G A G T C C G A T A T C G A C G T A G C T C T G A A G T C G A T C G T A C C T G A A C T G A G T C
p-value:1e-16
log p-value:-3.807e+01
Information Content per bp:1.795
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 31.1bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCTGGGTAACAGC
--AGGGTAACAGC
 C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTGGGTAACAGC-
--TGAGTGACAGSC
 C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTGGGTAACAGC
-NTGATTGACAGN
 C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGGGTAACAGC
SCCTAGCAACAG-
 C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTGGGTAACAGC
WDNCTGGGCA-----
 A C G T A C G T C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTGGGTAACAGC
HTGCTGAGTCAT---
 A C G T A C G T C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTGGGTAACAGC
-BTGABTGACAGS
 C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGGTAACAGC
KGTTGCTAGGMAACA--
 A C G T A C G T A C G T A C G T C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGGTAACAGC
AWWNTGCTGAGTCAT---
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
C G T A C G T A C G T A G C A T G C A T T A C G G T A C G A C T A C T G C G T A A T C G A C G T G T A C C G T A A G C T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGGTAACAGC
NTGCTGAGTCATCCN
 A C G T A C G T C T A G A G T C A G C T A C T G C T A G A C T G A G C T C T G A C G T A A T G C C G T A C T A G T A G C
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T