Information for 13-RTCCCAGCAATWC (Motif 11)

C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
Reverse Opposite:
A T C G C G T A C T G A G A C T A C G T A T C G A G T C C A G T A T C G C A T G T A C G T G C A G A T C
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.664
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets47.6 +/- 27.0bp
Average Position of motif in Background58.5 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFK/MA0496.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RTCCCAGCAATWC
CTGAGTCAGCAATTT
 A C G T A C G T C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RTCCCAGCAATWC-
HWWGTCAGCAWWTTT
 A C G T C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---RTCCCAGCAATWC--
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RTCCCAGCAATWC
--GTCAGCANNTN
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:RTCCCAGCAATWC
---NCTGGAATGC
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:RTCCCAGCAATWC
----CAGCC----
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RTCCCAGCAATWC------
--ACAAGCAATTAATGAAT
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RTCCCAGCAATWC------
--ACAAGCAATTAATGAAT
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RTCCCAGCAATWC
-NGTCAGCANTTT
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RTCCCAGCAATWC
--CACAGN-----
 C T A G A C G T A T G C G A T C T A G C G C T A A C T G A T G C G T C A C T G A A G C T C G A T A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T