Information for 9-CTTTGTTCTC (Motif 10)

A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C
Reverse Opposite:
A C T G C T G A C T A G G T C A T C G A G A T C C G T A C G T A C G T A C T A G
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.824
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets45.9 +/- 29.0bp
Average Position of motif in Background46.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTCTC--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
YCTTTGTTCC-
 A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTCTC--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
CCTTTGTTTT-
 A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
CCWTTGTYYB-
 A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCTC
CCATTGTTTT-
 A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTTTGTTCTC
NCCATTGTTC--
 A C G T A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGTTCTC-
AACCCTTTGATCTTT
 A C G T A C G T A C G T A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGTTCTC--
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGTTCTC-
CCTTTGATCTTT
 A C G T A G T C C G A T G A C T A C G T C T A G A C G T A C G T G A T C A G C T T A G C A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T