Information for 17-TTTTGTCTCT (Motif 29)

A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.384e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets77.8 +/- 11.8bp
Average Position of motif in Background63.5 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTCTCT
CCTTTGTTTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTCTCT--
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTTGTCTCT
ACTTTCGTTTCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTGTCTCT
TCTTATCT--
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTGTCTCT-----
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTCTCT
TTCTTATCTGT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTTGTCTCT-
TCTTATCTCCC
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A C G T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTCTCT
CCWTTGTY---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTTTGTCTCT
AGATTCTTATCTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTCTCT
CCATTGTTTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T