Information for 20-CAATTTTCAATTT (Motif 24)

A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T
Reverse Opposite:
C G T A G C T A C G T A A G C T C G A T A T C G C G T A T C G A C G T A C G T A C G A T A C G T C T A G
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.4 +/- 24.0bp
Average Position of motif in Background71.5 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAATTTTCAATTT-
--ACTTTCACTTTC
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAATTTTCAATTT-
--AGTTTCAGTTTC
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF7/MA0772.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAATTTTCAATTT---
--ANTTTCGCTTTCGN
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAATTTTCAATTT-
--AGTTTCAKTTTC
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATTTTCAATTT------
NTAATTDGCYAATTANNWWD
 A C G T A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAATTTTCAATTT-
--RSTTTCRSTTTC
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAATTTTCAATTT-
--ASTTTCASTTYC
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAATTTTCAATTT--
TCAGTTTCATTTTCC
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAATTTTCAATTT
--ATTTTCCATT-
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAATTTTCAATTT---
NNNTATTGAATTGNNN
 A G T C C G T A C G T A G C A T C G A T A C G T C G A T A T G C C G T A C T G A C G A T C G A T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T