Information for 3-TTCTCYCTTATTGACA (Motif 2)

C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T T G A C C G T A G T C A G A C T C T G A C G T A C T A G C T G A C T A G C G T A C A T G C G T A C G T A
p-value:1e-24
log p-value:-5.716e+01
Information Content per bp:1.723
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 24.8bp
Average Position of motif in Background69.1 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TTCTCYCTTATTGACA--
-------ATATTTACATA
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTCTCYCTTATTGACA----
-----BSNTGTTTACWYWGN
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TTCTCYCTTATTGACA--
------CNTGTTTACATA
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.62
Offset:10
Orientation:forward strand
Alignment:TTCTCYCTTATTGACA--
----------TTGACAGG
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTCTCYCTTATTGACA---
--NAAANTTATTGAANCAN
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCTCYCTTATTGACA----
---NNNTTTGTTTACTTTTN
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.60
Offset:10
Orientation:forward strand
Alignment:TTCTCYCTTATTGACA-
----------TTGACAG
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTCTCYCTTATTGACA--
-------ATATTTACATA
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.60
Offset:10
Orientation:forward strand
Alignment:TTCTCYCTTATTGACA--
----------TTGACAGC
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTCTCYCTTATTGACA--
------NTGATTGACAGN
 C G A T G C A T G A T C G C A T G A T C G A C T A G T C C G A T A G C T C T G A A C G T C G A T A C T G C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G