Information for 11-AAAGTGCAAACAC (Motif 11)

C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
Reverse Opposite:
C A T G A C G T A C T G A G C T C G A T C A G T A C T G A T G C T G C A A T G C A C G T A C G T A G C T
p-value:1e-12
log p-value:-2.781e+01
Information Content per bp:1.793
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets61.9 +/- 26.9bp
Average Position of motif in Background38.6 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAGTGCAAACAC
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAAGTGCAAACAC-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAGTGCAAACAC---
-CAAAGTAAACANNNN
 C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXP3/MA0850.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AAAGTGCAAACAC
-----GTAAACA-
 C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
A C G T A C G T A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTGCAAACAC
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGTGCAAACAC-
--WWTRTAAACAVG
 C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C A C G T
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTGCAAACAC
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAAGTGCAAACAC
-----GTAAACA-
 C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGTGCAAACAC--
CAAAAGTAAACAAAG
 C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAGTGCAAACAC
--AAAGTAAACA-
 C T G A G T C A C G T A A T C G A C G T T A C G A G T C G C T A C G T A C T G A A G T C G T C A G A T C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T