Information for 3-GGKYMTTMACTCA (Motif 6)

A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C G T A C T G C G T A C T G A A C G T C T G A G T C A A G T C A G T C
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 28.2bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GGKYMTTMACTCA
------TGACTCA
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGKYMTTMACTCA----
-NNCATTCATTCATNNN
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

BATF::JUN/MA0462.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GGKYMTTMACTCA----
------TGAGTCATTTC
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGKYMTTMACTCA
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGKYMTTMACTCA--
-----ATGASTCATH
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGKYMTTMACTCA--
-----ATGACTCATC
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGKYMTTMACTCA
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGKYMTTMACTCA-
AAGGTAATTAGCTCAT
 A C G T A C G T A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGKYMTTMACTCA
-GSCTGTCACTCA
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGKYMTTMACTCA---
------TGACTCAGCA
 A C T G A C T G A C G T A G C T G T C A A G C T C G A T G T A C C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A