Information for 9-AKTGGCTGCGCTC (Motif 9)

C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
Reverse Opposite:
C T A G G T C A C T A G A G T C A C T G A G T C C T G A A C T G A G T C A G T C C G T A G T A C A G C T
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.844
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.7 +/- 29.4bp
Average Position of motif in Background44.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AKTGGCTGCGCTC
TGATTGGCTANN---
 A C G T A C G T C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AKTGGCTGCGCTC
CCGATTGGCT------
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AKTGGCTGCGCTC
-TWGTCTGV----
 C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AKTGGCTGCGCTC
-TTGGCA------
 C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AKTGGCTGCGCTC-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AKTGGCTGCGCTC
NTTGGCANN----
 C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AKTGGCTGCGCTC
CTGATTGGTCNATTT-
 A C G T A C G T A C G T C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AKTGGCTGCGCTC
---NGCTN-----
 C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AKTGGCTGCGCTC
-GAGSCCGAGC--
 C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AKTGGCTGCGCTC
----GCTGTG---
 C T G A A C T G A C G T A C T G A C T G A G T C A G C T A C T G G T A C A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T