Information for 9-AGCCAACTCC (Motif 8)

C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C
Reverse Opposite:
A C T G A C T G C T G A A C T G A C G T G C A T A T C G C T A G A G T C A C G T
p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.837
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif76.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.0 +/- 26.3bp
Average Position of motif in Background54.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGCCAACTCC
CGTGCCAAG---
 A C G T A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCCAACTCC
TGCCAA----
 C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCCAACTCC------
TACGAGACTCCTCTAAC
 A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAACTCC
BCAGACWA----
 A C G T A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAACTCC-----
NNGGCGACACCTCNNN
 A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCCAACTCC----
CGACCAACTGCCGTG
 A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCCAACTCC
GGTGCCAAGT--
 A C G T A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCAACTCC-----
CGACCAACTGCCATGC
 A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCCAACTCC--
--CCAACTGCCA
 C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C A C G T A C G T
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCAACTCC
CAGCC------
 A C G T C G T A C T A G G A T C T A G C C G T A G T C A T G A C A G C T G T A C G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T