Information for 8-GBCCVACTTCAGA (Motif 8)

A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G C T G A C G T A A C T G A C G T A T C G A C T G A T C G T A C G A G T C
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.852
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.8 +/- 29.8bp
Average Position of motif in Background37.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GBCCVACTTCAGA
---CCACTTGAA-
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GBCCVACTTCAGA
--ACCACTTGAA-
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GBCCVACTTCAGA
--NCCACTTCCGG
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A
A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GBCCVACTTCAGA---
ATAACCACTTGAAAATT
 A C G T A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

ETS(ETS)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GBCCVACTTCAGA--
-----ACTTCCGGTT
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GBCCVACTTCAGA-
---CCACTTCCGGC
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A A C G T
A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GBCCVACTTCAGA
--RSCACTYRAG-
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

ETV3/MA0763.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GBCCVACTTCAGA-
----CACTTCCGGT
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T C A G T G T A C G T A C C T A G C T A G A G C T

ELK1/MA0028.2/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GBCCVACTTCAGA-
----NACTTCCGGT
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GBCCVACTTCAGA-
----CACTTCCGCT
 A C T G A G T C T A G C A G T C T A G C C G T A A G T C A C G T A G C T A G T C C G T A A C T G C T G A A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T